Datasetall-ab-ratio-log-sorted
PhenotypeNoPhenotypeAvailable
Upregulated in classna_neg
GeneSetREACTOME_TRANSCRIPTION
Enrichment Score (ES)-0.6048702
Normalized Enrichment Score (NES)-2.45953
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_TRANSCRIPTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TCEB1TCEB1
Entrez,  Source
transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)1751.535-0.0272No
2POLR2EPOLR2E
Entrez,  Source
polymerase (RNA) II (DNA directed) polypeptide E, 25kDa1861.500-0.0021No
3RNMTRNMT
Entrez,  Source
RNA (guanine-7-) methyltransferase2781.242-0.0078No
4POLR2CPOLR2C
Entrez,  Source
polymerase (RNA) II (DNA directed) polypeptide C, 33kDa3651.093-0.0148No
5POLR2HPOLR2H
Entrez,  Source
polymerase (RNA) II (DNA directed) polypeptide H3711.0830.0041No
6SNRPD3SNRPD3
Entrez,  Source
small nuclear ribonucleoprotein D3 polypeptide 18kDa4450.978-0.0009No
7TAF9TAF9
Entrez,  Source
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa7280.683-0.0785No
8MAPK3MAPK3
Entrez,  Source
mitogen-activated protein kinase 38260.600-0.0983No
9TCEB2TCEB2
Entrez,  Source
transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B)9610.492-0.1320No
10GTF2F2GTF2F2
Entrez,  Source
general transcription factor IIF, polypeptide 2, 30kDa10060.464-0.1373No
11GTF2E2GTF2E2
Entrez,  Source
general transcription factor IIE, polypeptide 2, beta 34kDa15460.088-0.3086No
12RBM8ARBM8A
Entrez,  Source
RNA binding motif protein 8A15690.078-0.3142No
13SNRPBSNRPB
Entrez,  Source
small nuclear ribonucleoprotein polypeptides B and B115790.071-0.3158No
14SSBSSB
Entrez,  Source
Sjogren syndrome antigen B (autoantigen La)16550.032-0.3393No
15POLR1CPOLR1C
Entrez,  Source
polymerase (RNA) I polypeptide C, 30kDa16830.015-0.3476No
16GTF2F1GTF2F1
Entrez,  Source
general transcription factor IIF, polypeptide 1, 74kDa16920.013-0.3500No
17GTF2BGTF2B
Entrez,  Source
general transcription factor IIB16960.010-0.3507No
18SNRPGSNRPG
Entrez,  Source
small nuclear ribonucleoprotein polypeptide G1913-0.121-0.4178No
19POLR2BPOLR2B
Entrez,  Source
polymerase (RNA) II (DNA directed) polypeptide B, 140kDa1998-0.178-0.4414No
20NCBP1NCBP1
Entrez,  Source
nuclear cap binding protein subunit 1, 80kDa2065-0.221-0.4584No
21TFAMTFAM
Entrez,  Source
transcription factor A, mitochondrial2102-0.243-0.4653No
22SNRPFSNRPF
Entrez,  Source
small nuclear ribonucleoprotein polypeptide F2186-0.292-0.4865No
23CDK7CDK7
Entrez,  Source
cyclin-dependent kinase 7 (MO15 homolog, Xenopus laevis, cdk-activating kinase)2214-0.314-0.4892No
24CSTF2CSTF2
Entrez,  Source
cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa2242-0.343-0.4914No
25SUPT5HSUPT5H
Entrez,  Source
suppressor of Ty 5 homolog (S. cerevisiae)2266-0.363-0.4919No
26MAGOHMAGOH
Entrez,  Source
mago-nashi homolog, proliferation-associated (Drosophila)2273-0.366-0.4869No
27SSRP1SSRP1
Entrez,  Source
structure specific recognition protein 12356-0.434-0.5051No
28NUDT21NUDT21
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 212421-0.493-0.5163No
29U2AF2U2AF2
Entrez,  Source
U2 small nuclear RNA auxiliary factor 22429-0.496-0.5092No
30CBX3CBX3
Entrez,  Source
chromobox homolog 3 (HP1 gamma homolog, Drosophila)2691-0.760-0.5786No
31SRSF32759-0.851-0.5840No
32GTF2E1GTF2E1
Entrez,  Source
general transcription factor IIE, polypeptide 1, alpha 56kDa2825-0.944-0.5870Yes
33UPF3BUPF3B
Entrez,  Source
UPF3 regulator of nonsense transcripts homolog B (yeast)2880-1.032-0.5849Yes
34U2AF1U2AF1
Entrez,  Source
U2 small nuclear RNA auxiliary factor 12897-1.057-0.5701Yes
35SRSF52952-1.151-0.5657Yes
36HIST1H2ABHIST1H2AB
Entrez,  Source
histone cluster 1, H2ab2964-1.185-0.5468Yes
37HIST1H2ACHIST1H2AC
Entrez,  Source
histone cluster 1, H2ac2965-1.185-0.5245Yes
38HIST1H2ADHIST1H2AD
Entrez,  Source
histone cluster 1, H2ad2966-1.185-0.5021Yes
39HIST1H2AJHIST1H2AJ
Entrez,  Source
histone cluster 1, H2aj2969-1.185-0.4804Yes
40HIST2H2AA3HIST2H2AA3
Entrez,  Source
histone cluster 2, H2aa32970-1.185-0.4580Yes
41HIST2H2ACHIST2H2AC
Entrez,  Source
histone cluster 2, H2ac2971-1.185-0.4356Yes
42HIST1H2BCHIST1H2BC
Entrez,  Source
histone cluster 1, H2bc2995-1.263-0.4191Yes
43HIST1H2BDHIST1H2BD
Entrez,  Source
histone cluster 1, H2bd2996-1.263-0.3953Yes
44HIST1H2BHHIST1H2BH
Entrez,  Source
histone cluster 1, H2bh2997-1.263-0.3714Yes
45HIST1H2BKHIST1H2BK
Entrez,  Source
histone cluster 1, H2bk2998-1.263-0.3476Yes
46HIST1H2BLHIST1H2BL
Entrez,  Source
histone cluster 1, H2bl2999-1.263-0.3237Yes
47HIST1H2BMHIST1H2BM
Entrez,  Source
histone cluster 1, H2bm3000-1.263-0.2999Yes
48HIST1H2BNHIST1H2BN
Entrez,  Source
histone cluster 1, H2bn3001-1.263-0.2760Yes
49SRSF63012-1.321-0.2543Yes
50POLRMTPOLRMT
Entrez,  Source
polymerase (RNA) mitochondrial (DNA directed)3052-1.463-0.2392Yes
51TCEA1TCEA1
Entrez,  Source
transcription elongation factor A (SII), 13071-1.544-0.2158Yes
52SRSF73113-1.769-0.1955Yes
53SRSF13116-1.796-0.1622Yes
54SRSF23120-1.838-0.1285Yes
55SRSF113134-1.949-0.0958Yes
56HIST1H4AHIST1H4A
Entrez,  Source
histone cluster 1, H4a3143-2.055-0.0596Yes
57SRRM1SRRM1
Entrez,  Source
serine/arginine repetitive matrix 13171-3.6320.0003Yes
Table: GSEA details [plain text format]



Fig 2: REACTOME_TRANSCRIPTION: Random ES distribution   
Gene set null distribution of ES for REACTOME_TRANSCRIPTION